Metagenomic studies focus on assessing microbial diversity, genetic and evolutionary relationships, community constituents, ...

This lab accompanies the lecture, with hands-on practical assignments to achieve a firmer understanding of bioinformatics tools and principles. Assignments and a term project emphasize the application ...

The Lazypipe series is a collection of bioinformatics pipelines developed by our research group to enhance the discovery and analysis of viruses from metagenomic next-generation sequencing (mNGS) data ...

Historical introduction and overview -- Collecting and storing sequences in the laboratory -- Alignment of pairs of sequences -- Introduction to probability and statistical analysis of sequence ...

The hidden Markov model (HMM), a statistical model widely applied in machine learning, has proven effective in addressing various problems in ...

Analysis of Roche KAPA Target Enrichment kit experimental data obtained on an Illumina sequencing system is most frequently performed using a variety of publicly available, open-source analysis tools.

“I’m a virologist at heart,” Lefkowitz said. “I’ve always been a virologist. And as much as computational work drives what I do, I do it because of my interest in biology, especially in viruses.” ...

This hands-on course introduces databases, approaches, and software for the analysis and interpretation of molecular sequences. Practical assignments and a term project emphasize the application of ...